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1

Serverless execution of scientific workflows: Experiments with HyperFlow, AWS Lambda and Google Cloud Functions

Malawski, Maciej, Gajek, Adam, Zima, Adam, Balis, Bartosz, Figiela, Kamil

Journal:

Future Generation Computer Systems

Year:

2017

Language:

english

File:

PDF, 902 KB

english, 2017

2

In Search for a Scalable & Reactive Architecture of a Cloud Application: CQRS and Event Sourcing Case Study

Debski, Andrzej, Szczepanik, Bartlomiej, Malawski, Maciej, Spahr, Stefan, Muthig, Dirk

Journal:

Year:

2017

Language:

english

File:

PDF, 1.66 MB

english, 2017

3

How to Use Google App Engine for Free Computing

Malawski, Maciej, Kuzniar, Maciej, Wojcik, Piotr, Bubak, Marian

Journal:

IEEE Internet Computing

Year:

2013

Language:

english

File:

PDF, 1.91 MB

english, 2013

4

Algorithms for cost- and deadline-constrained provisioning for scientific workflow ensembles in IaaS clouds

Malawski, Maciej, Juve, Gideon, Deelman, Ewa, Nabrzyski, Jarek

Journal:

Future Generation Computer Systems

Year:

2015

Language:

english

File:

PDF, 1.09 MB

english, 2015

5

Storage-aware Algorithms for Scheduling of Workflow Ensembles in Clouds

Bryk, Piotr, Malawski, Maciej, Juve, Gideon, Deelman, Ewa

Journal:

Journal of Grid Computing

Year:

2016

Language:

english

File:

PDF, 1.23 MB

english, 2016

6

Performance evaluation of heterogeneous cloud functions

Figiela, Kamil, Gajek, Adam, Zima, Adam, Obrok, Beata, Malawski, Maciej

Journal:

Concurrency and Computation: Practice and Experience

Year:

2018

Language:

english

File:

PDF, 1.19 MB

english, 2018

7

In silico Structural Study of Random Amino Acid Sequence Proteins Not Present in Nature

Katarzyna Prymula, Monika Piwowar, Marek Kochanczyk, Lukasz Flis, Maciej Malawski, Tomasz Szepieniec, Giovanni Evangelista, Giuseppe Minervini, Fabio Polticelli, Zdzisław Wiśniowski, Kinga Sałapa, Ewa

Journal:

Chemistry & Biodiversity

Year:

2009

Language:

english

File:

PDF, 1.44 MB

english, 2009

8

Workflow composer and service registry for grid applications

Marian Bubak, Tomasz Gubała, Michał Kapałka, Maciej Malawski, Katarzyna Rycerz

Journal:

Future Generation Computer Systems

Year:

2005

Language:

english

File:

PDF, 235 KB

english, 2005

9

The Collage Authoring Environment

Piotr Nowakowski, Eryk Ciepiela, Daniel Harężlak, Joanna Kocot, Marek Kasztelnik, Tomasz Bartyński, Jan Meizner, Grzegorz Dyk, Maciej Malawski

Journal:

Procedia Computer Science

Year:

2011

Language:

english

File:

PDF, 839 KB

english, 2011

10

Invocation of operations from script-based Grid applications

Maciej Malawski, Tomasz Bartyński, Marian Bubak

Journal:

Future Generation Computer Systems

Year:

2010

Language:

english

File:

PDF, 5.14 MB

english, 2010

11

Component Approach to Computational Applications on Clouds

Maciej Malawski, Jan Meizner, Marian Bubak, Paweł Gepner

Journal:

Procedia Computer Science

Year:

2011

Language:

english

File:

PDF, 330 KB

english, 2011

12

[IEEE 2008 21st International Symposium on Computer-Based Medical Systems (CBMS) - Jyvaskyla, Finland (2008.06.17-2008.06.19)] 2008 21st IEEE International Symposium on Computer-Based Medical Systems - Virtual Laboratory for Development and Execution of Biomedical Collaborative Applications

Bubak, Marian, Gubala, Tomasz, Malawski, Maciej, Balis, Bartosz, Funika, Wlodzimierz, Bartynski, Tomasz, Ciepiela, Eryk, Harezlak, Daniel, Kasztelnik, Marek, Kocot, Joanna, Krol, Dariusz, Nowakowski,

Year:

2008

Language:

english

File:

PDF, 1.58 MB

english, 2008

13

Cost minimization for computational applications on hybrid cloud infrastructures

Malawski, Maciej, Figiela, Kamil, Nabrzyski, Jarek

Journal:

Future Generation Computer Systems

Year:

2013

Language:

english

File:

PDF, 1020 KB

english, 2013

14

[IEEE 2012 SC - International Conference for High Performance Computing, Networking, Storage and Analysis - Salt Lake City, UT, USA (2012.11.10-2012.11.16)] 2012 International Conference for High Performance Computing, Networking, Storage and Analysis - Cost- and deadline-constrained provisioning for scientific workflow ensembles in IaaS clouds

Malawski, Maciej, Juve, Gideon, Deelman, Ewa, Nabrzyski, Jarek

Year:

2012

Language:

english

File:

PDF, 195 KB

english, 2012

15

[IEEE 2013 IEEE 5th International Conference on Cloud Computing Technology and Science (CloudCom) - Bristol, United Kingdom (2013.12.2-2013.12.5)] 2013 IEEE 5th International Conference on Cloud Computing Technology and Science - Introducing PRECIP: An API for Managing Repeatable Experiments in the Cloud

Azarnoosh, Sepideh, Rynge, Mats, Juve, Gideon, Deelman, Ewa, Niec, Michal, Malawski, Maciej, Silva, Rafael Ferreira da

Year:

2013

Language:

english

File:

PDF, 1.73 MB

english, 2013

16

HOSTED SCIENCE: MANAGING COMPUTATIONAL WORKFLOWS IN THE CLOUD

DEELMAN, EWA, JUVE, GIDEON, MALAWSKI, MACIEJ, NABRZYSKI, JAREK

Journal:

Parallel Processing Letters

Year:

2013

Language:

english

File:

PDF, 335 KB

english, 2013

17

[IEEE 2006 Second IEEE International Conference on e-Science and Grid Computing (e-Science'06) - Amsterdam, The Netherlands (2006.12.4-2006.12.4)] 2006 Second IEEE International Conference on e-Science and Grid Computing (e-Science'06) - Grid Support for HLA-Based Collaborative Environment for Vascular Reconstruction

Rycerz, Katarzyna, Bubak, Marian, Malawski, Maciej, Sloot, Peter

Year:

2006

Language:

english

File:

PDF, 143 KB

english, 2006

18

[IEEE 2013 International Conference on Cloud and Green Computing (CGC) - Karlsruhe, Germany (2013.09.30-2013.10.2)] 2013 International Conference on Cloud and Green Computing - Energy-Constrained Provisioning for Scientific Workflow Ensembles

Pietri, Ilia, Malawski, Maciej, Juve, Gideon, Deelman, Ewa, Nabrzyski, Jarek, Sakellariou, Rizos

Year:

2013

Language:

english

File:

PDF, 400 KB

english, 2013

19

[IEEE 2006 Second IEEE International Conference on e-Science and Grid Computing (e-Science'06) - Amsterdam, The Netherlands (2006.12.4-2006.12.4)] 2006 Second IEEE International Conference on e-Science and Grid Computing (e-Science'06) - Semantic Composition of Scientific Workflows Based on the Petri Nets Formalism

Gubala, Tomasz, Herezlak, Daniel, Bubak, Marian, Malawski, Maciej

Year:

2006

Language:

english

File:

PDF, 224 KB

english, 2006

20

[IEEE Distributed Processing (IPDPS) - Rome, Italy (2009.05.23-2009.05.29)] 2009 IEEE International Symposium on Parallel & Distributed Processing - Providing security for MOCCA component environment

Dyrda, Michal, Malawski, Maciej, Bubak, Marian, Naqvi, Syed

Year:

2009

Language:

english

File:

PDF, 256 KB

english, 2009

21

Execution Management and Efficient Resource Provisioning for Flood Decision Support

Balis, Bartosz, Kasztelnik, Marek, Malawski, Maciej, Nowakowski, Piotr, Wilk, Bartosz, Pawlik, Maciej, Bubak, Marian

Journal:

Procedia Computer Science

Year:

2015

Language:

english

File:

PDF, 3.93 MB

english, 2015

22

Leveraging Workflows and Clouds for a Multi-frontal Solver for Finite Element Meshes

Balis, Bartosz, Figiela, Kamil, Malawski, Maciej, Jopek, Konrad

Journal:

Procedia Computer Science

Year:

2015

Language:

english

File:

PDF, 359 KB

english, 2015

23

[IEEE 2014 IEEE International Conference on Big Data and Cloud Computing (BdCloud) - Sydney, Australia (2014.12.3-2014.12.5)] 2014 IEEE Fourth International Conference on Big Data and Cloud Computing - Modeling, Optimization and Performance Evaluation of Scientific Workflows in Clouds

Figiela, Kamil, Malawski, Maciej

Year:

2014

Language:

english

File:

PDF, 130 KB

english, 2014

24

Porting HPC applications to the cloud: a multi-frontal solver case study

Balis, Bartosz, Figiela, Kamil, Jopek, Konrad, Malawski, Maciej, Pawlik, Maciej

Journal:

Journal of Computational Science

Year:

2016

Language:

english

File:

PDF, 1.05 MB

english, 2016

25

Dedicated IT infrastructure for Smart Levee Monitoring and Flood Decision Support

Balis, Bartosz, Bartynski, Tomasz, Brzoza-Woch, Robert, Bubak, Marian, Harezlak, Daniel, Kasztelnik, Marek, Konieczny, Marek, Kwolek, Bartosz, Malawski, Maciej, Nawrocki, Piotr, Nowakowski, Piotr, Szy

Journal:

E3S Web of Conferences

Year:

2016

Language:

english

File:

PDF, 2.86 MB

english, 2016

26

Genetic traces of never born proteins

Piwowar, Monika, Matczyńska, Ewa, Malawski, Maciej, Szapieniec, Tomasz, Roterman-Konieczna, Irena

Journal:

Bio-Algorithms and Med-Systems

Year:

2017

Language:

english

File:

PDF, 2.25 MB

english, 2017

27

Cloud computing infrastructure for the VPH community

Nowakowski, Piotr, Bubak, Marian, Bartyński, Tomasz, Gubała, Tomasz, Harężlak, Daniel, Kasztelnik, Marek, Malawski, Maciej, Meizner, Jan

Journal:

Journal of Computational Science

Year:

2017

Language:

english

File:

PDF, 1.45 MB

english, 2017

28

Smart levee monitoring and flood decision support system: reference architecture and urgent computing management

Balis, Bartosz, Bartynski, Tomasz, Bubak, Marian, Harezlak, Daniel, Kasztelnik, Marek, Malawski, Maciej, Nowakowski, Piotr, Pawlik, Maciej, Wilk, Bartosz

Journal:

Procedia Computer Science

Year:

2017

Language:

english

File:

PDF, 1.23 MB

english, 2017

29

Topology-aware Job Allocation in 3D Torus-based HPC Systems with Hard Job Priority Constraints

Li, Kangkang, Malawski, Maciej, Nabrzyski, Jarek

Journal:

Procedia Computer Science

Year:

2017

Language:

english

File:

PDF, 599 KB

english, 2017

30

Support for Taverna workflows in the VPH-Share cloud platform

Kasztelnik, Marek, Coto, Ernesto, Bubak, Marian, Malawski, Maciej, Nowakowski, Piotr, Arenas, Juan, Saglimbeni, Alfredo, Testi, Debora, Frangi, Alejandro F.

Journal:

Computer Methods and Programs in Biomedicine

Year:

2017

Language:

english

File:

PDF, 1.17 MB

english, 2017

31

[IEEE 2017 16th International Symposium on Parallel and Distributed Computing (ISPDC) - Innsbruck (2017.7.3-2017.7.6)] 2017 16th International Symposium on Parallel and Distributed Computing (ISPDC) - Reducing Fragmentation on 3D Torus-Based HPC Systems Using Packing-Based Job Scheduling and Job Placement Reconfiguration

Li, Kangkang, Malawski, Maciej, Nabrzyski, Jarek

Year:

2017

Language:

english

File:

PDF, 769 KB

english, 2017

32

Tracing of large-scale actor systems

Ciołczyk, Michał, Wojakowski, Mariusz, Malawski, Maciej

Journal:

Concurrency and Computation: Practice and Experience

Year:

2018

Language:

english

File:

PDF, 1.01 MB

english, 2018

33

Scheduling Multilevel Deadline-Constrained Scientific Workflows on Clouds Based on Cost Optimization

Malawski, Maciej, Figiela, Kamil, Bubak, Marian, Deelman, Ewa, Nabrzyski, Jarek

Journal:

Scientific Programming

Year:

2015

Language:

english

File:

PDF, 2.30 MB

english, 2015

34

Constructing Workflows from Script Applications

Baranowski, Mikołaj, Belloum, Adam, Bubak, Marian, Malawski, Maciej

Journal:

Scientific Programming

Year:

2012

Language:

english

File:

PDF, 1.70 MB

english, 2012

35

Performance evaluation of heterogeneous cloud functions

Figiela, Kamil, Gajek, Adam, Zima, Adam, Obrok, Beata, Malawski, Maciej

Journal:

Concurrency and Computation: Practice and Experience

Year:

2018

File:

PDF, 1.19 MB

2018

36

Large-scale Urban Traffic Simulation with Scala and High-Performance Computing System

Janczykowski, Michal, Turek, Wojciech, Malawski, Maciej, Byrski, Aleksander

Journal:

Journal of Computational Science

Year:

2019

Language:

english

File:

PDF, 1.63 MB

english, 2019

37

Software development strategies for High Energy Physics simulations based on Quantum Field Theory

Przedzinski, Tomasz, Malawski, Maciej, Was, Zbigniew

Journal:

Computing in Science & Engineering

Year:

2019

Language:

english

File:

PDF, 889 KB

english, 2019

38

[Lecture Notes in Computer Science] Euro-Par 2020: Parallel Processing Volume 12247 (26th International Conference on Parallel and Distributed Computing, Warsaw, Poland, August 24â28, 2020, Proceedings) ||

Malawski, Maciej, Rzadca, Krzysztof

Year:

2020

File:

PDF, 42.98 MB

2020

39

Hit-to-lead and lead optimization binding free energy calculations for G protein-coupled receptors

Wan, Shunzhou, Potterton, Andrew, Husseini, Fouad S., Wright, David W., Heifetz, Alexander, Malawski, Maciej, Townsend-Nicholson, Andrea, Coveney, Peter V.

Journal:

Interface Focus

Year:

2020

File:

PDF, 852 KB

2020